Online GeneMerge

Please choose an organism:

Arabidopsis thaliana Bacillus anthracis Ames Bacillus subtilis Bos taurus Caenorhabditis elegans Coxiella burnetii RSA 493 Danio rerio Drosophila melanogaster Gallus gallus Glossina morsitans Homo sapiens Leishmania major Mus musculus Oryza sativa Plasmodium falciparum Rattus norvegicus Saccharomyces cerevisiae Schizosaccharomyces pombe Shewanella oneidensis MR-1 Trypanosoma brucei Vibrio cholerae Virus Bioinformatics

Enter a category to search:
GO Molecular Function (All species)
GO Biological Process (All species)
GO Cellular Component (All species)
GO Molecular Function Complete-Level (All species)
GO Biological Process Complete-Level (All species)
GO Cellular Component Complete-Level (All species)
MeSH Major Topic Medical Subject Headings (Human)
KEGG Metabolic and Regulatory Pathways (Yeast and Fly)
Deletion Viablity (Yeast)
Chromosomal Location (Fly & Mouse)
Chromosomal Arm Location (Fly)
Chromosomal Map Location (Fly)
Intron Presence/Absence (Fly)
SubtiList Database Annotated Functions/Pathways/Processes (B. subtilis)
Specific Text-based Functions derived from SubtiList DB (B. subtilis)
General Text-based Functions derived from SubtiList DB (B. subtilis)
Above plus special Spore and Sporulation categories (B. subtilis)
RNAi Phenotype Embryonic Lethality: 100% vs Not (C. elegans)
RNAi Phenotype Embryonic Lethality: 6 percentage categories (C. elegans)
All RNAi Phenotypes: brood size, growth, embryonic lethality, post-embryonic phenotypes (C. elegans)

• Where do these gene-associations come from?

• Try out GeneMerge by cutting and pasting these Saccharomyces cerevisiae genes in the boxes below:
  

  Note!! Gene names must be of a particular format.

  Please try the updated Gene Name Coverter for Human, Mouse, Fly, Yeast, and Arabidopsis genes if you are having trouble converting your gene names.

  Remember!! The study set of genes must be a subset of the population set, i.e. (study ≤ pop) & (study ∈ pop) .

  
  Please paste list of population genes (genes on the array):
  

  Please paste list of study genes (up/down regulated genes):


Castillo-Davis, C.I. and D.L. Hartl 2003. Bioinformatics 19(7):891-892


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GeneMerge - Post-genomic analysis, data mining, and hypothesis testing

Cristian I. Castillo-Davis
Department of Biology
University of Maryland, College Park
castill0@umd.edu